Cluster no. 98

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Cluster is part of supercluster: 44

Cluster characteristics:

size 454
size_real 454
ecount 2202
supercluster 44
annotations_summary
pair_completeness 0.609929078014184
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00220264317180617
satellite_probability 6.64175142550315e-22
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S8 149
S9 154
S7 151
comparative analysis - number of edges between species:
S8 S9 S7
S8 215 250 233
S9 250 257 255
S7 233 255 253
comparative analysis - observed/expected number of edges between species
S8 S9 S7
S8 0.970 1.040 0.991
S9 1.040 0.973 0.994
S7 0.991 0.994 1.010

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
53 19 0.0534
97 14 0.11
29 2 0.00153
2780 2 0.0354
5070 2 0.0354
6510 2 0.0354
14900 2 0.0357
25000 2 0.0357
13 1 0.000432
22 1 0.000684
60 1 0.00267
94 1 0.012
1300 1 0.0169
2650 1 0.0174
2670 1 0.0174
10700 1 0.0179
16000 1 0.0179
18100 1 0.0179
21100 1 0.0179
21900 1 0.0179
23500 1 0.0179

CL98 ----> CL53

image

No. of shared pairs: :19

CL98 ----> CL97

image

No. of shared pairs: :14