Cluster no. 93

Cluster no. 93

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Cluster is part of supercluster: 39

Cluster characteristics:

size	611
size_real	611
ecount	2572
supercluster	39
annotations_summary
pair_completeness	0.219560878243513
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.0671031096563011
satellite_probability	3.15619634142292e-17
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	204
S9	211
S7	196

comparative analysis - number of edges between species:

	S8	S9	S7
S8	356	294	308
S9	294	247	238
S7	308	238	290

comparative analysis - observed/expected number of edges between species

	S8	S9	S7
S8	0.998	1.010	0.989
S9	1.010	1.050	0.939
S7	0.989	0.939	1.070

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

11	113
32	61
31	16
83	3
26	2
72	1

clusters connected through mates:

Cluster	Number of shared read pairs	k

11	102	0.0492
32	45	0.0264
26	21	0.0108
72	12	0.0169
350	9	0.0429
1010	5	0.0249
56	4	0.00475
49	3	0.00305
16	2	0.000908
476	2	0.00995
788	2	0.0101
1	1	0.000346
3	1	0.000312
9	1	0.000438
13	1	0.000407
20	1	0.000482
22	1	0.000624
24	1	0.000727
31	1	0.00113
41	1	0.000861
59	1	0.00106
81	1	0.00137
83	1	0.00197
90	1	0.00295
114	1	0.00389
351	1	0.00481
893	1	0.00503
2480	1	0.00508
3580	1	0.00506
3720	1	0.00506
5690	1	0.00508
5980	1	0.0051
7310	1	0.00508
9920	1	0.00509
11600	1	0.00509
11600	1	0.00509
11900	1	0.00509
13300	1	0.00509
13900	1	0.00509
14800	1	0.00509
15900	1	0.00509
16200	1	0.00509
17300	1	0.00509
18800	1	0.00509
19600	1	0.00509
24900	1	0.00509
25700	1	0.00509

CL93 ----> CL11

No. of shared pairs: :102

CL93 ----> CL32

No. of shared pairs: :45

CL93 ----> CL26

No. of shared pairs: :21

CL93 ----> CL72

No. of shared pairs: :12