Cluster no. 80

Cluster no. 80

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Cluster is part of supercluster: 31

Cluster characteristics:

size	1249
size_real	1249
ecount	8481
supercluster	31
annotations_summary
pair_completeness	0.467685076380729
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.000800640512409928
satellite_probability	3.54668226065428e-21
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	416
S9	400
S7	433

comparative analysis - number of edges between species:

	S8	S9	S7
S8	941	858	974
S9	858	842	974
S7	974	974	1090

comparative analysis - observed/expected number of edges between species

	S8	S9	S7
S8	1.040	0.982	0.981
S9	0.982	0.999	1.020
S7	0.981	1.020	1.000

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

30	19
15	9

clusters connected through mates:

Cluster	Number of shared read pairs	k

15	72	0.0559
30	19	0.0225
102	12	0.0395
28	8	0.0108
1	7	0.00239
2	4	0.00182
24	4	0.00284
2740	4	0.0175
1320	3	0.0131
3460	3	0.0131
6600	3	0.0132
7170	3	0.0132
4	2	0.000744
16	2	0.000895
4920	2	0.00877
11800	2	0.00879
13400	2	0.00879
16100	2	0.00879
18700	2	0.00879
20700	2	0.00879
20700	2	0.00879
22500	2	0.00879
3	1	0.000309
5	1	0.000347
6	1	0.000364
9	1	0.000432
12	1	0.000877
13	1	0.000402
17	1	0.000912
18	1	0.000831
20	1	0.000475
21	1	0.00114
22	1	0.000612
29	1	0.000676
36	1	0.00115
38	1	0.000922
39	1	0.000966
55	1	0.00204
63	1	0.00126
92	1	0.00313
95	1	0.00329
103	1	0.00385
109	1	0.00406
123	1	0.00372
159	1	0.00382
1210	1	0.00437
1760	1	0.00436
3170	1	0.00438
3240	1	0.00438
3930	1	0.00438
4000	1	0.00438
4500	1	0.00439
5880	1	0.00439
6000	1	0.00441
9240	1	0.0044
10200	1	0.0044
12600	1	0.0044
22000	1	0.0044
22300	1	0.0044
22900	1	0.0044
23000	1	0.0044
25900	1	0.0044

CL80 ----> CL15

No. of shared pairs: :72

CL80 ----> CL30

No. of shared pairs: :19

CL80 ----> CL102

No. of shared pairs: :12