Cluster no. 294

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Cluster is part of supercluster: 201

Cluster characteristics:

size 72
size_real 72
ecount 322
supercluster 201
annotations_summary 36.11% 5S_rDNA/5S_rDNA
pair_completeness 0.846153846153846
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0138888888888889
satellite_probability 1.78459432152064e-22
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 18
S4 14
S6 40
comparative analysis - number of edges between species:
S5 S4 S6
S5 16.0 12 48.5
S4 12.0 9 39.0
S6 48.5 39 98.0
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 0.880 0.842 1.100
S4 0.842 0.805 1.130
S6 1.100 1.130 0.917

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
5S_rDNA 5S_rDNA 26 0.36

clusters connected through mates:

Cluster Number of shared
read pairs		 k
19 1 0.000662