Cluster no. 292
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Cluster is part of supercluster: 199
Cluster characteristics:
| size |
73 |
| size_real |
73 |
| ecount |
220 |
| supercluster |
199 |
| annotations_summary |
|
| pair_completeness |
0.377358490566038 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.356164383561644 |
| satellite_probability |
4.21511473801512e-08 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
23 |
| S4 |
30 |
| S6 |
20 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
25.0 |
33.0 |
19.5 |
| S4 |
33.0 |
31.0 |
22.5 |
| S6 |
19.5 |
22.5 |
14.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.916 |
1.080 |
0.988 |
| S4 |
1.080 |
0.911 |
1.020 |
| S6 |
0.988 |
1.020 |
0.982 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 1460 |
3 |
0.136 |
| 210 |
2 |
0.0354 |
| 43400 |
2 |
0.114 |
| 5460 |
1 |
0.0571 |
| 32300 |
1 |
0.0571 |
| 39700 |
1 |
0.0571 |
|