Cluster no. 291
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Cluster is part of supercluster: 198
Cluster characteristics:
| size |
73 |
| size_real |
73 |
| ecount |
166 |
| supercluster |
198 |
| annotations_summary |
|
| pair_completeness |
0.431372549019608 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0136986301369863 |
| satellite_probability |
1.0041894271145e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
24 |
| S4 |
29 |
| S6 |
20 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
15 |
22 |
15 |
| S4 |
22 |
29 |
18 |
| S6 |
15 |
18 |
12 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.921 |
1.020 |
1.060 |
| S4 |
1.020 |
1.010 |
0.962 |
| S6 |
1.060 |
0.962 |
0.984 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 2550 |
4 |
0.222 |
| 13600 |
3 |
0.188 |
| 415 |
2 |
0.0816 |
| 42900 |
2 |
0.129 |
| 10 |
1 |
0.000446 |
| 25 |
1 |
0.00159 |
| 501 |
1 |
0.0417 |
| 1060 |
1 |
0.0513 |
| 8330 |
1 |
0.0625 |
| 17000 |
1 |
0.0645 |
| 44000 |
1 |
0.0645 |
|