Cluster no. 290
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Cluster is part of supercluster: 197
Cluster characteristics:
| size |
74 |
| size_real |
74 |
| ecount |
180 |
| supercluster |
197 |
| annotations_summary |
|
| pair_completeness |
0.39622641509434 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0135135135135135 |
| satellite_probability |
1.08796458838458e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
21 |
| S4 |
33 |
| S6 |
20 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
10.0 |
22.0 |
11.5 |
| S4 |
22.0 |
51.0 |
20.5 |
| S6 |
11.5 |
20.5 |
11.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.951 |
0.974 |
1.110 |
| S4 |
0.974 |
1.050 |
0.918 |
| S6 |
1.110 |
0.918 |
1.070 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 66 |
6 |
0.0098 |
| 2440 |
3 |
0.154 |
| 41 |
2 |
0.00181 |
| 52 |
2 |
0.00239 |
| 54 |
1 |
0.000979 |
| 388 |
1 |
0.0317 |
| 1610 |
1 |
0.0526 |
| 9110 |
1 |
0.0571 |
|