Cluster no. 288

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Cluster is part of supercluster: 195

Cluster characteristics:

size 74
size_real 74
ecount 197
supercluster 195
annotations_summary
pair_completeness 0.48
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.216216216216216
satellite_probability 1.19262023905145e-11
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 11
S4 32
S6 31
comparative analysis - number of edges between species:
S5 S4 S6
S5 4.0 10.5 16
S4 10.5 26.0 38
S6 16.0 38.0 38
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 0.847 0.910 1.120
S4 0.910 0.923 1.090
S6 1.120 1.090 0.884

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
134 13 0.0471
98 3 0.00392
38600 1 0.0714
43200 1 0.0714

CL288 ----> CL134

image

No. of shared pairs: :13