Cluster no. 286

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Cluster is part of supercluster: 193

Cluster characteristics:

size 74
size_real 74
ecount 137
supercluster 193
annotations_summary
pair_completeness 0.104477611940298
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0135135135135135
satellite_probability 5.41198193010321e-21
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 25
S4 31
S6 18
comparative analysis - number of edges between species:
S5 S4 S6
S5 17.0 24 11.5
S4 24.0 22 11.0
S6 11.5 11 5.0
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 0.845 1.100 1.090
S4 1.100 0.928 0.961
S6 1.090 0.961 0.906

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
130 23 0.066
367 5 0.0971
16 1 0.000914
83 1 0.000891
691 1 0.026
1470 1 0.0282
28900 1 0.0323
32000 1 0.0323

CL286 ----> CL130

image

No. of shared pairs: :23