Cluster no. 285

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Cluster is part of supercluster: 192

Cluster characteristics:

size 75
size_real 75
ecount 212
supercluster 192
annotations_summary
pair_completeness 0.470588235294118
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0133333333333333
satellite_probability 8.64741555314371e-21
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 33
S4 22
S6 20
comparative analysis - number of edges between species:
S5 S4 S6
S5 36 30.0 27.0
S4 30 18.0 15.5
S6 27 15.5 13.0
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 0.882 1.080 1.110
S4 1.080 0.946 0.932
S6 1.110 0.932 0.895

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
62 11 0.0214
705 4 0.205
3540 2 0.121
24 1 0.000886
66 1 0.00164
603 1 0.0444
1810 1 0.0556

CL285 ----> CL62

image

No. of shared pairs: :11