Cluster no. 283
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Cluster is part of supercluster: 190
Cluster characteristics:
| size |
75 |
| size_real |
75 |
| ecount |
126 |
| supercluster |
190 |
| annotations_summary |
|
| pair_completeness |
0.339285714285714 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0133333333333333 |
| satellite_probability |
1.17646958017996e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
30 |
| S4 |
23 |
| S6 |
22 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
15.0 |
15.0 |
14.5 |
| S4 |
15.0 |
13.0 |
15.5 |
| S6 |
14.5 |
15.5 |
8.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.954 |
0.976 |
1.080 |
| S4 |
0.976 |
0.866 |
1.180 |
| S6 |
1.080 |
1.180 |
0.698 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 576 |
4 |
0.167 |
| 2520 |
4 |
0.182 |
| 632 |
2 |
0.0784 |
| 13500 |
2 |
0.1 |
| 3420 |
1 |
0.0488 |
| 6040 |
1 |
0.0513 |
| 6170 |
1 |
0.0513 |
| 44900 |
1 |
0.0513 |
|