Cluster no. 282
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Cluster is part of supercluster: 189
Cluster characteristics:
| size |
75 |
| size_real |
75 |
| ecount |
141 |
| supercluster |
189 |
| annotations_summary |
|
| pair_completeness |
0.293103448275862 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0133333333333333 |
| satellite_probability |
1.1552035631474e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
22 |
| S4 |
23 |
| S6 |
30 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
14 |
9.0 |
21.0 |
| S4 |
9 |
10.0 |
16.5 |
| S6 |
21 |
16.5 |
24.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.020 |
0.812 |
1.090 |
| S4 |
0.812 |
1.120 |
1.070 |
| S6 |
1.090 |
1.070 |
0.895 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 671 |
5 |
0.185 |
| 407 |
3 |
0.0882 |
| 601 |
3 |
0.0984 |
| 6280 |
3 |
0.133 |
| 10 |
1 |
0.000445 |
| 28 |
1 |
0.000598 |
| 483 |
1 |
0.0286 |
| 1260 |
1 |
0.0392 |
| 1740 |
1 |
0.04 |
| 5970 |
1 |
0.0444 |
|