Cluster no. 276
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Cluster is part of supercluster: 183
Cluster characteristics:
| size |
79 |
| size_real |
79 |
| ecount |
412 |
| supercluster |
183 |
| annotations_summary |
|
| pair_completeness |
0.645833333333333 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.556962025316456 |
| satellite_probability |
0.000289293730081031 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
23 |
| S4 |
33 |
| S6 |
23 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
48.0 |
58.0 |
45.5 |
| S4 |
58.0 |
55.0 |
39.5 |
| S6 |
45.5 |
39.5 |
23.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.862 |
1.030 |
1.150 |
| S4 |
1.030 |
0.974 |
0.988 |
| S6 |
1.150 |
0.988 |
0.812 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 8150 |
2 |
0.2 |
| 84 |
1 |
0.00141 |
| 7620 |
1 |
0.1 |
| 41000 |
1 |
0.105 |
|