Cluster no. 273
Go back to cluster table
Cluster is part of supercluster: 180
Cluster characteristics:
| size |
81 |
| size_real |
81 |
| ecount |
257 |
| supercluster |
180 |
| annotations_summary |
|
| pair_completeness |
0.396551724137931 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0123456790123457 |
| satellite_probability |
1.08796458838458e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
27 |
| S4 |
25 |
| S6 |
29 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
23.0 |
25 |
36.5 |
| S4 |
25.0 |
19 |
27.0 |
| S6 |
36.5 |
27 |
38.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.828 |
1.070 |
1.090 |
| S4 |
1.070 |
0.969 |
0.963 |
| S6 |
1.090 |
0.963 |
0.948 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 3290 |
3 |
0.146 |
| 247 |
2 |
0.05 |
| 3820 |
2 |
0.1 |
| 4730 |
2 |
0.105 |
| 9400 |
2 |
0.105 |
| 5 |
1 |
0.000448 |
| 7 |
1 |
0.000462 |
| 9 |
1 |
0.000869 |
| 20 |
1 |
0.000602 |
| 22 |
1 |
0.00121 |
| 87 |
1 |
0.00164 |
| 122 |
1 |
0.00244 |
| 1630 |
1 |
0.0488 |
| 6550 |
1 |
0.0541 |
| 25800 |
1 |
0.0541 |
|