Cluster no. 268
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Cluster is part of supercluster: 175
Cluster characteristics:
| size |
85 |
| size_real |
85 |
| ecount |
194 |
| supercluster |
175 |
| annotations_summary |
|
| pair_completeness |
0.287878787878788 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0117647058823529 |
| satellite_probability |
1.1552035631474e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
37 |
| S4 |
27 |
| S6 |
21 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
44.0 |
21.5 |
23.5 |
| S4 |
21.5 |
16.0 |
14.5 |
| S6 |
23.5 |
14.5 |
15.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.080 |
0.901 |
0.967 |
| S4 |
0.901 |
1.150 |
1.020 |
| S6 |
0.967 |
1.020 |
1.040 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 28 |
8 |
0.00478 |
| 27500 |
2 |
0.0816 |
| 33 |
1 |
0.00118 |
| 54 |
1 |
0.000972 |
| 23000 |
1 |
0.0408 |
| 28200 |
1 |
0.0408 |
|