Cluster no. 265
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Cluster is part of supercluster: 172
Cluster characteristics:
| size |
86 |
| size_real |
86 |
| ecount |
133 |
| supercluster |
172 |
| annotations_summary |
|
| pair_completeness |
0.194444444444444 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0116279069767442 |
| satellite_probability |
8.87680651322255e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
25 |
| S4 |
25 |
| S6 |
36 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
15.0 |
12 |
15.5 |
| S4 |
12.0 |
10 |
13.0 |
| S6 |
15.5 |
13 |
27.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.100 |
1.07 |
0.874 |
| S4 |
1.070 |
1.09 |
0.890 |
| S6 |
0.874 |
0.89 |
1.170 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 57 |
6 |
0.00523 |
| 138 |
4 |
0.014 |
| 939 |
2 |
0.0588 |
| 1240 |
2 |
0.0625 |
| 33700 |
2 |
0.0667 |
| 30 |
1 |
0.000608 |
| 895 |
1 |
0.029 |
| 2760 |
1 |
0.0317 |
| 6400 |
1 |
0.0333 |
| 10600 |
1 |
0.0328 |
| 13500 |
1 |
0.0328 |
| 26600 |
1 |
0.0333 |
| 27700 |
1 |
0.0333 |
| 42300 |
1 |
0.0333 |
|