Cluster no. 264
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Cluster is part of supercluster: 171
Cluster characteristics:
| size |
86 |
| size_real |
86 |
| ecount |
215 |
| supercluster |
171 |
| annotations_summary |
|
| pair_completeness |
0.194444444444444 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.104651162790698 |
| satellite_probability |
7.63345687612942e-16 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
28 |
| S4 |
29 |
| S6 |
29 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
32 |
20.0 |
22.0 |
| S4 |
20 |
27.0 |
22.5 |
| S6 |
22 |
22.5 |
27.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.260 |
0.836 |
0.894 |
| S4 |
0.836 |
1.200 |
0.973 |
| S6 |
0.894 |
0.973 |
1.140 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 49 |
22 |
0.019 |
| 225 |
2 |
0.0258 |
| 1770 |
2 |
0.0615 |
| 2450 |
2 |
0.0635 |
| 12 |
1 |
0.00036 |
| 50 |
1 |
0.00109 |
| 31100 |
1 |
0.0333 |
|
CL264 ----> CL49
No. of shared pairs: :22