Cluster no. 261
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Cluster is part of supercluster: 168
Cluster characteristics:
| size |
88 |
| size_real |
88 |
| ecount |
470 |
| supercluster |
168 |
| annotations_summary |
|
| pair_completeness |
0.543859649122807 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0113636363636364 |
| satellite_probability |
5.9149989235368e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
26 |
| S4 |
30 |
| S6 |
32 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
45.0 |
48.5 |
53.5 |
| S4 |
48.5 |
47.0 |
54.0 |
| S6 |
53.5 |
54.0 |
66.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.979 |
1.040 |
0.986 |
| S4 |
1.040 |
0.988 |
0.978 |
| S6 |
0.986 |
0.978 |
1.030 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 35 |
5 |
0.00476 |
| 1130 |
5 |
0.27 |
| 17 |
3 |
0.002 |
| 16100 |
1 |
0.0714 |
| 35900 |
1 |
0.0714 |
|