Cluster no. 258
Go back to cluster table
Cluster is part of supercluster: 165
Cluster characteristics:
| size |
90 |
| size_real |
90 |
| ecount |
368 |
| supercluster |
165 |
| annotations_summary |
|
| pair_completeness |
0.323529411764706 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0111111111111111 |
| satellite_probability |
1.17858386578192e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
27 |
| S4 |
41 |
| S6 |
22 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
18.0 |
51.5 |
15.5 |
| S4 |
51.5 |
113.0 |
42.5 |
| S6 |
15.5 |
42.5 |
18.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.917 |
1.080 |
0.883 |
| S4 |
1.080 |
0.970 |
0.994 |
| S6 |
0.883 |
0.994 |
1.150 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 5 |
1 |
0.000447 |
| 12 |
1 |
0.000361 |
| 16 |
1 |
0.00092 |
| 20 |
1 |
6e-04 |
| 31 |
1 |
0.000849 |
| 35 |
1 |
0.000944 |
| 56 |
1 |
0.000856 |
| 63 |
1 |
0.00086 |
| 73 |
1 |
0.0011 |
| 75 |
1 |
0.00187 |
| 103 |
1 |
0.00134 |
| 14500 |
1 |
0.0417 |
| 20400 |
1 |
0.0417 |
| 21400 |
1 |
0.0417 |
|