Cluster no. 257

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Cluster is part of supercluster: 164

Cluster characteristics:

size 91
size_real 91
ecount 327
supercluster 164
annotations_summary
pair_completeness 0.378787878787879
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.010989010989011
satellite_probability 1.1303462298218e-20
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 41
S4 29
S6 21
comparative analysis - number of edges between species:
S5 S4 S6
S5 57.0 39.5 35.5
S4 39.5 36.0 27.0
S6 35.5 27.0 30.0
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 1.070 0.955 0.951
S4 0.955 1.120 0.931
S6 0.951 0.931 1.150

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
144 10 0.105
1400 2 0.0833
56 1 0.000858
133 1 0.00578
14400 1 0.0465
35300 1 0.0465

CL257 ----> CL144

image

No. of shared pairs: :10