Cluster no. 256
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Cluster is part of supercluster: 163
Cluster characteristics:
| size |
92 |
| size_real |
92 |
| ecount |
392 |
| supercluster |
163 |
| annotations_summary |
|
| pair_completeness |
0.4375 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0108695652173913 |
| satellite_probability |
9.71787494816826e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
42 |
| S4 |
23 |
| S6 |
27 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
88.0 |
37 |
66.5 |
| S4 |
37.0 |
9 |
24.0 |
| S6 |
66.5 |
24 |
40.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.941 |
1.08 |
1.040 |
| S4 |
1.080 |
0.72 |
1.030 |
| S6 |
1.040 |
1.03 |
0.921 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 117 |
7 |
0.0137 |
| 3530 |
3 |
0.143 |
| 3530 |
2 |
0.0952 |
| 40600 |
2 |
0.105 |
| 45800 |
1 |
0.0526 |
|