Cluster no. 255
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Cluster is part of supercluster: 162
Cluster characteristics:
| size |
94 |
| size_real |
94 |
| ecount |
194 |
| supercluster |
162 |
| annotations_summary |
|
| pair_completeness |
0.220779220779221 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0106382978723404 |
| satellite_probability |
9.91635870094047e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
29 |
| S4 |
34 |
| S6 |
31 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
16.0 |
22.5 |
10.5 |
| S4 |
22.5 |
39.0 |
22.5 |
| S6 |
10.5 |
22.5 |
28.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.290 |
1.060 |
0.681 |
| S4 |
1.060 |
1.070 |
0.852 |
| S6 |
0.681 |
0.852 |
1.460 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 73 |
7 |
0.00766 |
| 39 |
2 |
0.00258 |
| 2360 |
2 |
0.0597 |
| 11100 |
2 |
0.0635 |
| 4000 |
1 |
0.0308 |
| 39600 |
1 |
0.0323 |
|