Cluster no. 252
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Cluster is part of supercluster: 159
Cluster characteristics:
| size |
95 |
| size_real |
95 |
| ecount |
351 |
| supercluster |
159 |
| annotations_summary |
|
| pair_completeness |
0.376811594202899 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0105263157894737 |
| satellite_probability |
1.1303462298218e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
42 |
| S4 |
30 |
| S6 |
23 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
82.0 |
49.5 |
36 |
| S4 |
49.5 |
35.0 |
21 |
| S6 |
36.0 |
21.0 |
21 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.030 |
0.983 |
0.967 |
| S4 |
0.983 |
1.100 |
0.896 |
| S6 |
0.967 |
0.896 |
1.210 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 55 |
9 |
0.00864 |
| 316 |
7 |
0.165 |
| 196 |
4 |
0.0465 |
| 904 |
2 |
0.0741 |
| 936 |
2 |
0.0784 |
| 68 |
1 |
0.000868 |
| 766 |
1 |
0.0333 |
| 5840 |
1 |
0.0426 |
| 15600 |
1 |
0.0444 |
| 17000 |
1 |
0.0444 |
| 18500 |
1 |
0.0444 |
| 39500 |
1 |
0.0444 |
|