Cluster no. 251
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Cluster is part of supercluster: 158
Cluster characteristics:
| size |
96 |
| size_real |
96 |
| ecount |
256 |
| supercluster |
158 |
| annotations_summary |
|
| pair_completeness |
0.215189873417722 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0104166666666667 |
| satellite_probability |
9.91635870094047e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
36 |
| S4 |
20 |
| S6 |
40 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
39.0 |
17.0 |
43.5 |
| S4 |
17.0 |
7.0 |
17.5 |
| S6 |
43.5 |
17.5 |
54.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.010 |
1.050 |
0.973 |
| S4 |
1.050 |
1.040 |
0.939 |
| S6 |
0.973 |
0.939 |
1.050 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 90 |
8 |
0.0154 |
| 598 |
5 |
0.119 |
| 655 |
5 |
0.128 |
| 2660 |
3 |
0.087 |
| 62 |
2 |
0.00376 |
| 3940 |
2 |
0.0615 |
| 42400 |
2 |
0.0625 |
| 40 |
1 |
0.00113 |
| 41 |
1 |
0.000894 |
| 918 |
1 |
0.0263 |
| 7950 |
1 |
0.0308 |
| 45500 |
1 |
0.0312 |
|