Cluster no. 250

Cluster no. 250

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Cluster is part of supercluster: 157

Cluster characteristics:

size	99
size_real	99
ecount	259
supercluster	157
annotations_summary
pair_completeness	0.302631578947368
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.0101010101010101
satellite_probability	1.16647336535817e-20
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S5	32
S4	30
S6	37

comparative analysis - number of edges between species:

	S5	S4	S6
S5	20.0	22	35.5
S4	22.0	18	31.0
S6	35.5	31	44.0

comparative analysis - observed/expected number of edges between species

	S5	S4	S6
S5	0.862	1.040	1.070
S4	1.040	0.925	1.020
S6	1.070	1.020	0.933

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

16

2

clusters connected through mates:

Cluster	Number of shared read pairs	k

205	15	0.252
16	13	0.0119
592	11	0.301
47	1	0.00122
58	1	0.000822
168	1	0.00617
8010	1	0.0357

CL250 ----> CL205

No. of shared pairs: :15

CL250 ----> CL16

No. of shared pairs: :13

CL250 ----> CL592

No. of shared pairs: :11