Cluster no. 249
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Cluster is part of supercluster: 156
Cluster characteristics:
| size |
101 |
| size_real |
101 |
| ecount |
214 |
| supercluster |
156 |
| annotations_summary |
|
| pair_completeness |
0.485294117647059 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.207920792079208 |
| satellite_probability |
5.43308974815109e-12 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
29 |
| S4 |
34 |
| S6 |
38 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
22.0 |
22.5 |
23.5 |
| S4 |
22.5 |
19.0 |
19.0 |
| S6 |
23.5 |
19.0 |
43.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.020 |
1.170 |
0.865 |
| S4 |
1.170 |
1.110 |
0.786 |
| S6 |
0.865 |
0.786 |
1.260 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 132 |
1 |
0.00587 |
| 234 |
1 |
0.0183 |
| 456 |
1 |
0.04 |
| 44900 |
1 |
0.0541 |
|