Cluster no. 246

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Cluster is part of supercluster: 153

Cluster characteristics:

size 102
size_real 102
ecount 194
supercluster 153
annotations_summary
pair_completeness 0.146067415730337
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00980392156862745
satellite_probability 7.34185081690782e-21
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 32
S4 45
S6 25
comparative analysis - number of edges between species:
S5 S4 S6
S5 19.0 26 12.5
S4 26.0 54 19.0
S6 12.5 19 6.0
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 1.110 0.886 1.120
S4 0.886 1.070 0.993
S6 1.120 0.993 0.828

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
15 13 0.0129
28 3 0.00178
7 1 0.000458
24 1 0.000867
53 1 0.00169
59 1 0.00105
516 1 0.0204
879 1 0.022
2060 1 0.0238
6340 1 0.025
19800 1 0.0256
38900 1 0.0256

CL246 ----> CL15

image

No. of shared pairs: :13