Cluster no. 244

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Cluster is part of supercluster: 151

Cluster characteristics:

size 106
size_real 106
ecount 326
supercluster 151
annotations_summary
pair_completeness 0.308641975308642
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00943396226415094
satellite_probability 1.17429072542671e-20
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 32
S4 44
S6 30
comparative analysis - number of edges between species:
S5 S4 S6
S5 28.0 43 29.5
S4 43.0 68 34.0
S6 29.5 34 17.0
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 0.904 0.962 1.190
S4 0.962 1.050 0.950
S6 1.190 0.950 0.855

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
80 10 0.0472
3750 4 0.131
6730 3 0.1
269 2 0.0444
1540 2 0.0625
1 1 0.000299
27 1 0.00108
71 1 0.00132
143 1 0.00463
613 1 0.029
1880 1 0.0308
10700 1 0.0339
23600 1 0.0345
39300 1 0.0345

CL244 ----> CL80

image

No. of shared pairs: :10