Cluster no. 243
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Cluster is part of supercluster: 150
Cluster characteristics:
| size |
106 |
| size_real |
106 |
| ecount |
610 |
| supercluster |
150 |
| annotations_summary |
|
| pair_completeness |
0.536231884057971 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00943396226415094 |
| satellite_probability |
5.9149989235368e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
42 |
| S4 |
35 |
| S6 |
29 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
92 |
76.0 |
63.0 |
| S4 |
76 |
60.0 |
66.5 |
| S6 |
63 |
66.5 |
47.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.050 |
0.991 |
0.943 |
| S4 |
0.991 |
0.893 |
1.130 |
| S6 |
0.943 |
1.130 |
0.920 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 8 |
1 |
0.000491 |
| 22 |
1 |
0.00122 |
| 28 |
1 |
6e-04 |
| 42 |
1 |
0.00107 |
| 80 |
1 |
0.005 |
| 891 |
1 |
0.0465 |
|