Cluster no. 231
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Cluster is part of supercluster: 138
Cluster characteristics:
| size |
117 |
| size_real |
117 |
| ecount |
250 |
| supercluster |
138 |
| annotations_summary |
|
| pair_completeness |
0.206185567010309 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00854700854700855 |
| satellite_probability |
9.58585004034497e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
39 |
| S4 |
35 |
| S6 |
43 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
35 |
18.0 |
34.0 |
| S4 |
18 |
12.0 |
31.5 |
| S6 |
34 |
31.5 |
36.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.160 |
0.841 |
0.963 |
| S4 |
0.841 |
0.793 |
1.260 |
| S6 |
0.963 |
1.260 |
0.874 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 75 |
8 |
0.0146 |
| 191 |
7 |
0.0725 |
| 351 |
7 |
0.124 |
| 626 |
6 |
0.124 |
| 2050 |
3 |
0.0706 |
| 1730 |
2 |
0.0476 |
| 1950 |
2 |
0.0488 |
| 44 |
1 |
0.00177 |
| 4580 |
1 |
0.0244 |
| 12000 |
1 |
0.0256 |
| 13200 |
1 |
0.025 |
| 20400 |
1 |
0.0253 |
| 21900 |
1 |
0.0253 |
| 30400 |
1 |
0.0253 |
|