Cluster no. 223
Go back to cluster table
Cluster is part of supercluster: 130
Cluster characteristics:
| size |
134 |
| size_real |
134 |
| ecount |
432 |
| supercluster |
130 |
| annotations_summary |
|
| pair_completeness |
0.634146341463415 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00757575757575758 |
| satellite_probability |
2.89983006268482e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
0.997742663656885 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
44 |
| S4 |
42 |
| S6 |
48 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
53.0 |
40.5 |
53 |
| S4 |
40.5 |
42.0 |
56 |
| S6 |
53.0 |
56.0 |
49 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.090 |
0.884 |
1.01 |
| S4 |
0.884 |
0.970 |
1.13 |
| S6 |
1.010 |
1.130 |
0.87 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 5 |
1 |
0.000449 |
| 31 |
1 |
0.000855 |
| 38 |
1 |
0.00186 |
|