Cluster no. 210
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Cluster is part of supercluster: 117
Cluster characteristics:
| size |
182 |
| size_real |
182 |
| ecount |
361 |
| supercluster |
117 |
| annotations_summary |
|
| pair_completeness |
0.389312977099237 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00549450549450549 |
| satellite_probability |
1.11063897810074e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
55 |
| S4 |
64 |
| S6 |
63 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
37.0 |
43 |
38.5 |
| S4 |
43.0 |
38 |
40.0 |
| S6 |
38.5 |
40 |
43.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.951 |
1.080 |
0.965 |
| S4 |
1.080 |
0.937 |
0.982 |
| S6 |
0.965 |
0.982 |
1.050 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 543 |
6 |
0.124 |
| 292 |
2 |
0.0354 |
| 2240 |
2 |
0.0476 |
| 2270 |
2 |
0.0476 |
| 10 |
1 |
0.000441 |
| 33 |
1 |
0.00116 |
| 38 |
1 |
0.00178 |
| 61 |
1 |
0.000813 |
| 143 |
1 |
0.00439 |
| 626 |
1 |
0.02 |
| 864 |
1 |
0.0215 |
| 1970 |
1 |
0.0233 |
| 4160 |
1 |
0.0241 |
| 35700 |
1 |
0.0244 |
| 46800 |
1 |
0.0244 |
|