Cluster no. 207

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Cluster is part of supercluster: 114

Cluster characteristics:

size 187
size_real 187
ecount 888
supercluster 114
annotations_summary 6.42% Class_II/Subclass_1/TIR/EnSpm_CACTA:CACTA-TPase
pair_completeness 0.731481481481481
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0053475935828877
satellite_probability 9.7369044902173e-22
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 58
S4 52
S6 77
comparative analysis - number of edges between species:
S5 S4 S6
S5 90 73 120
S4 73 59 108
S6 120 108 136
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 0.994 0.953 1.040
S4 0.953 0.910 1.100
S6 1.040 1.100 0.909

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
EnSpm_CACTA CACTA-TPase EnSpm_CACTA CACTA-TPase 12 0.064

clusters connected through mates:

Cluster Number of shared
read pairs		 k
797 8 0.4
375 6 0.3
190 5 0.128
4560 2 0.118
5170 2 0.121
21 1 0.000443
132 1 0.00597