Cluster no. 206

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Cluster is part of supercluster: 113

Cluster characteristics:

size 198
size_real 198
ecount 556
supercluster 113
annotations_summary
pair_completeness 0.27741935483871
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00505050505050505
satellite_probability 1.14058372808344e-20
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 58
S4 73
S6 67
comparative analysis - number of edges between species:
S5 S4 S6
S5 29.0 59.0 50.5
S4 59.0 90.0 75.5
S6 50.5 75.5 67.0
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 0.841 1.060 1.050
S4 1.060 0.993 0.969
S6 1.050 0.969 1.000

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
147 17 0.0556
675 6 0.0945
103 3 0.00384
346 2 0.0276
4070 2 0.0342
7600 2 0.0348
41 1 0.000875
58 1 0.000803
1460 1 0.0163
5140 1 0.0175
11200 1 0.0174
28000 1 0.0175

CL206 ----> CL147

image

No. of shared pairs: :17