Cluster no. 205
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Cluster is part of supercluster: 112
Cluster characteristics:
| size |
198 |
| size_real |
198 |
| ecount |
606 |
| supercluster |
112 |
| annotations_summary |
|
| pair_completeness |
0.5 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00505050505050505 |
| satellite_probability |
7.48572094908218e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
51 |
| S4 |
74 |
| S6 |
73 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
36.0 |
56.0 |
56.5 |
| S4 |
56.0 |
92.0 |
81.5 |
| S6 |
56.5 |
81.5 |
90.0 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.989 |
0.996 |
1.010 |
| S4 |
0.996 |
1.060 |
0.944 |
| S6 |
1.010 |
0.944 |
1.050 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 54 |
20 |
0.0193 |
| 250 |
15 |
0.252 |
| 16 |
3 |
0.00274 |
| 6540 |
2 |
0.0588 |
| 13400 |
2 |
0.058 |
| 22800 |
2 |
0.0588 |
| 12 |
1 |
0.00036 |
| 39 |
1 |
0.00129 |
| 8010 |
1 |
0.029 |
| 33000 |
1 |
0.0294 |
| 39800 |
1 |
0.0294 |
|
CL205 ----> CL54
No. of shared pairs: :20
CL205 ----> CL250
No. of shared pairs: :15