Cluster no. 203
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Cluster is part of supercluster: 110
Cluster characteristics:
| size |
199 |
| size_real |
199 |
| ecount |
486 |
| supercluster |
110 |
| annotations_summary |
|
| pair_completeness |
0.542635658914729 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0050251256281407 |
| satellite_probability |
5.9149989235368e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
79 |
| S4 |
63 |
| S6 |
57 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
91.0 |
56.5 |
52 |
| S4 |
56.5 |
55.0 |
42 |
| S6 |
52.0 |
42.0 |
39 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
1.110 |
0.897 |
0.952 |
| S4 |
0.897 |
1.130 |
1.000 |
| S6 |
0.952 |
1.000 |
1.070 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 126 |
15 |
0.086 |
| 2340 |
4 |
0.121 |
| 1590 |
3 |
0.0896 |
| 2760 |
3 |
0.0909 |
| 7120 |
2 |
0.0635 |
| 26200 |
2 |
0.0656 |
| 30200 |
2 |
0.0656 |
| 92 |
1 |
0.00434 |
| 136 |
1 |
0.00581 |
| 3650 |
1 |
0.0312 |
| 4590 |
1 |
0.0323 |
| 6370 |
1 |
0.0317 |
| 8790 |
1 |
0.0323 |
| 13200 |
1 |
0.0323 |
| 36100 |
1 |
0.0328 |
| 41400 |
1 |
0.0328 |
| 46700 |
1 |
0.0328 |
|
CL203 ----> CL126
No. of shared pairs: :15