Cluster no. 201

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Cluster is part of supercluster: 108

Cluster characteristics:

size 208
size_real 208
ecount 343
supercluster 108
annotations_summary
pair_completeness 0.216374269005848
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00480769230769231
satellite_probability 1.54486496583492e-20
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 59
S4 81
S6 68
comparative analysis - number of edges between species:
S5 S4 S6
S5 24.0 35.5 24.5
S4 35.5 58.0 46.0
S6 24.5 46.0 49.0
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 1.170 1.040 0.837
S4 1.040 1.020 0.946
S6 0.837 0.946 1.180

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
367 3 0.0339
776 3 0.0397
5900 3 0.0435
11500 2 0.0292
13200 2 0.0292
45 1 0.000929
62 1 0.00176
691 1 0.0132
1250 1 0.0139
1350 1 0.0139
2980 1 0.0143
3640 1 0.0146
3930 1 0.0144
4320 1 0.0144
5500 1 0.0145
5630 1 0.0145
13700 1 0.0147
19200 1 0.0147
22500 1 0.0147