Cluster no. 187

Cluster no. 187

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Cluster is part of supercluster: 95

Cluster characteristics:

size	278
size_real	278
ecount	676
supercluster	95
annotations_summary
pair_completeness	0.383084577114428
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.00359712230215827
satellite_probability	7.55887620545779e-21
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S5	92
S4	83
S6	103

comparative analysis - number of edges between species:

	S5	S4	S6
S5	75	66	82
S4	66	49	73
S6	82	73	110

comparative analysis - observed/expected number of edges between species

	S5	S4	S6
S5	1.020	1.060	0.938
S4	1.060	0.937	0.991
S6	0.938	0.991	1.060

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster	Number of shared read pairs	k

75	17	0.0297
138	15	0.0472
408	6	0.0795
1670	3	0.0455
3450	2	0.0308
5430	2	0.0312
7960	2	0.0315
16200	2	0.0317
90	1	0.00182
645	1	0.0152
5140	1	0.0156
5720	1	0.0156
5980	1	0.0156
6050	1	0.0156
11600	1	0.0157
12800	1	0.0157
14700	1	0.0159
18800	1	0.0159
27700	1	0.0159
28100	1	0.0159
31400	1	0.0159
42500	1	0.0159

CL187 ----> CL75

No. of shared pairs: :17

CL187 ----> CL138

No. of shared pairs: :15