Cluster no. 183
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Cluster is part of supercluster: 91
Cluster characteristics:
| size |
302 |
| size_real |
302 |
| ecount |
1027 |
| supercluster |
91 |
| annotations_summary |
|
| pair_completeness |
0.564766839378238 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0033112582781457 |
| satellite_probability |
1.29477276776204e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S5 |
104 |
| S4 |
97 |
| S6 |
101 |
comparative analysis - number of edges between species:
|
S5 |
S4 |
S6 |
| S5 |
88 |
110 |
108 |
| S4 |
110 |
117 |
126 |
| S6 |
108 |
126 |
135 |
comparative analysis - observed/expected number of edges between species
|
S5 |
S4 |
S6 |
| S5 |
0.965 |
1.050 |
0.984 |
| S4 |
1.050 |
0.967 |
0.992 |
| S6 |
0.984 |
0.992 |
1.020 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 239 |
2 |
0.032 |
| 2 |
1 |
0.000319 |
| 12 |
1 |
0.000359 |
| 45 |
1 |
0.000951 |
| 50 |
1 |
0.00107 |
| 83 |
1 |
0.000881 |
| 103 |
1 |
0.0013 |
| 1240 |
1 |
0.0213 |
| 2600 |
1 |
0.022 |
| 5850 |
1 |
0.0233 |
| 9360 |
1 |
0.023 |
| 10700 |
1 |
0.023 |
| 12700 |
1 |
0.0235 |
| 26600 |
1 |
0.0233 |
| 33000 |
1 |
0.0233 |
| 33400 |
1 |
0.0233 |
| 36400 |
1 |
0.0233 |
|