Cluster no. 182

Cluster no. 182

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Cluster is part of supercluster: 90

Cluster characteristics:

size	372
size_real	372
ecount	4969
supercluster	90
annotations_summary
pair_completeness	0.252525252525252
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.620967741935484
satellite_probability	0.000151251234235478
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S5	128
S4	121
S6	123

comparative analysis - number of edges between species:

	S5	S4	S6
S5	412	489	525
S4	489	560	638
S6	525	638	694

comparative analysis - observed/expected number of edges between species

	S5	S4	S6
S5	1.010	1.010	0.985
S4	1.010	0.978	1.010
S6	0.985	1.010	1.000

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

49	50
104	30
81	2

clusters connected through mates:

Cluster	Number of shared read pairs	k

49	99	0.0797
104	68	0.0881
81	11	0.0104
32	2	0.0014
56	2	0.00159
2	1	0.000312
10	1	0.000427
38	1	0.00158
43	1	0.00105
65	1	0.00142

CL182 ----> CL49

No. of shared pairs: :99

CL182 ----> CL104

No. of shared pairs: :68

CL182 ----> CL81

No. of shared pairs: :11