Cluster no. 159

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Cluster is part of supercluster: 69

Cluster characteristics:

size 765
size_real 765
ecount 1473
supercluster 69
annotations_summary
pair_completeness 0.262376237623762
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00130718954248366
satellite_probability 1.39528303731336e-20
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 257
S4 244
S6 264
comparative analysis - number of edges between species:
S5 S4 S6
S5 161 138 168
S4 138 133 184
S6 168 184 201
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 1.090 0.956 0.96
S4 0.956 0.950 1.08
S6 0.960 1.080 0.97

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
1220 3 0.0132
7 2 0.000844
90 2 0.00281
627 2 0.00864
1350 2 0.00875
3020 2 0.00887
3480 2 0.00883
5730 2 0.00887
21100 2 0.00891
31100 2 0.00891
31100 2 0.00891
31200 2 0.00891
32500 2 0.00891
42600 2 0.00891
27 1 0.000891
58 1 0.000707
100 1 0.00197
106 1 0.00229
144 1 0.00336
147 1 0.00211
520 1 0.00426
1390 1 0.00441
1650 1 0.00442
2890 1 0.00442
3760 1 0.00444
3960 1 0.00442
4660 1 0.00442
5610 1 0.00445
5890 1 0.00443
6540 1 0.00443
8610 1 0.00446
9410 1 0.00444
10400 1 0.00444
10700 1 0.00444
12500 1 0.00444
13200 1 0.00444
17200 1 0.00445
20000 1 0.00445
21000 1 0.00445
23500 1 0.00445
25100 1 0.00445
29300 1 0.00445
29800 1 0.00445
31000 1 0.00445
34200 1 0.00445
35500 1 0.00445
38500 1 0.00445
39500 1 0.00445
44600 1 0.00445
47400 1 0.00445