Cluster no. 157

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Cluster is part of supercluster: 67

Cluster characteristics:

size 811
size_real 811
ecount 6252
supercluster 67
annotations_summary 89.89% organelle/plastid
1.48% organelle/mitochondria
pair_completeness 0.926365795724466
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00123304562268804
satellite_probability 1.56020511944627e-24
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 282
S4 280
S6 249
comparative analysis - number of edges between species:
S5 S4 S6
S5 728 744 652
S4 744 784 660
S6 652 660 630
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 1.010 1.000 0.989
S4 1.000 1.020 0.971
S6 0.989 0.971 1.040

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
mitochondria mitochondria 12 0.015
plastid plastid 729 0.899

clusters with similarity:

Cluster Number of similarity hits
154 1

clusters connected through mates:

Cluster Number of shared
read pairs		 k
148 9 0.257
154 8 0.239
15 1 0.00102
26 1 0.000487
54 1 0.000979
63 1 0.000866
116 1 0.0183
150 1 0.00363