Cluster no. 153

Cluster no. 153

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Cluster is part of supercluster: 65

Cluster characteristics:

size	905
size_real	905
ecount	13421
supercluster	65
annotations_summary
pair_completeness	0.518456375838926
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.0342541436464088
satellite_probability	2.1381336150938e-19
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S5	275
S4	290
S6	340

comparative analysis - number of edges between species:

	S5	S4	S6
S5	1320	1320	1550
S4	1320	1440	1560
S6	1550	1560	1790

comparative analysis - observed/expected number of edges between species

	S5	S4	S6
S5	1.01	0.980	1.010
S4	0.98	1.030	0.987
S6	1.01	0.987	1.000

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

56	117
43	73
6	29
1	23
71	11
77	9
36	4
31	3
21	2
112	2
11	1
94	1

clusters connected through mates:

Cluster	Number of shared read pairs	k

56	94	0.0729
43	63	0.0638
1	12	0.00346
6	6	0.00163
17	5	0.00306
71	5	0.00573
112	5	0.00657
11	4	0.00176
1900	4	0.027
21	3	0.00126
10	2	0.000843
19	2	0.00121
36	2	0.00166
115	2	0.00302
330	2	0.012
7360	2	0.0138
23200	2	0.0138
2	1	0.000309
3	1	0.000428
8	1	0.000462
24	1	0.000795
31	1	0.00077
32	1	0.000684
40	1	0.001
54	1	0.00087
59	1	0.000943
61	1	0.00075
68	1	0.000785
73	1	0.000973
84	1	0.00118
104	1	0.00124
111	1	0.0025
147	1	0.00254
168	1	0.00358
447	1	0.00635
5680	1	0.00687
25200	1	0.00692
33100	1	0.00692

CL153 ----> CL56

No. of shared pairs: :94

CL153 ----> CL43

No. of shared pairs: :63

CL153 ----> CL1

No. of shared pairs: :12