Cluster no. 145

Cluster no. 145

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Cluster is part of supercluster: 57

Cluster characteristics:

size	1226
size_real	1226
ecount	10112
supercluster	57
annotations_summary	96.08% organelle/plastid
pair_completeness	0.942947702060222
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.000815660685154976
satellite_probability	1.22924222468107e-24
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S5	376
S4	429
S6	421

comparative analysis - number of edges between species:

	S5	S4	S6
S5	999	1070	1070
S4	1070	1270	1200
S6	1070	1200	1160

comparative analysis - observed/expected number of edges between species

	S5	S4	S6
S5	1.030	0.975	1.000
S4	0.975	1.020	1.000
S6	1.000	1.000	0.998

protein domains:

protein domains:

Reads annotation summary

cl_string domain Freq proportion

plastid plastid 1178 0.96

clusters with similarity:

Cluster	Number of similarity hits

154	1
160	1

clusters connected through mates:

Cluster	Number of shared read pairs	k

154	12	0.333
160	9	0.265
56	1	0.000859
62	1	0.00192

CL145 ----> CL154

No. of shared pairs: :12