Cluster no. 110

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Cluster is part of supercluster: 4

Cluster characteristics:

size 2797
size_real 2797
ecount 43004
supercluster 4
annotations_summary
pair_completeness 0.338277511961723
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00357525920629246
satellite_probability 9.7548493215956e-21
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S5 926
S4 912
S6 959
comparative analysis - number of edges between species:
S5 S4 S6
S5 4680 4720 4820
S4 4720 4760 4780
S6 4820 4780 4920
comparative analysis - observed/expected number of edges between species
S5 S4 S6
S5 0.995 1.000 1.000
S4 1.000 1.010 0.993
S6 1.000 0.993 1.000

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
58 236
122 26
57 5

clusters connected through mates:

Cluster Number of shared
read pairs
k
58 501 0.266
57 116 0.0641
1340 8 0.0115
1 5 0.00125
61 5 0.00266
1250 5 0.00717
1320 5 0.00719
10 4 0.00137
412 4 0.00566
666 4 0.00573
1720 4 0.00575
2660 4 0.00576
27 3 0.00189
30 3 0.0013
38 3 0.00247
444 3 0.00429
485 3 0.00427
1290 3 0.00431
1720 3 0.00431
1770 3 0.00431
1970 3 0.00431
2080 3 0.00431
3720 3 0.00432
6300 3 0.00433
6540 3 0.00433
7710 3 0.00433
9020 3 0.00433
12200 3 0.00433
19 2 0.000909
24 2 0.00111
35 2 0.00116
41 2 0.00112
49 2 0.0011
59 2 0.00124
62 2 0.00168
84 2 0.00143
103 2 0.00141
381 2 0.00284
1140 2 0.00287
1290 2 0.00288
1920 2 0.00288
2520 2 0.00288
2910 2 0.00288
2960 2 0.00288
3240 2 0.00288
4760 2 0.00289
7570 2 0.00289
8960 2 0.00289
9580 2 0.00289
10700 2 0.00289
10900 2 0.00289
11200 2 0.00289
12100 2 0.00289
23600 2 0.00289
31600 2 0.00289
38600 2 0.00289
40200 2 0.00289
45100 2 0.00289
5 1 0.000344
6 1 0.000236
7 1 0.000352
11 1 0.000355
12 1 0.000291
16 1 0.00057
25 1 0.000766
28 1 0.000427
32 1 0.000497
53 1 0.000802
54 1 0.000589
60 1 0.00104
63 1 0.000546
68 1 0.000549
78 1 0.000798
80 1 0.00114
85 1 0.00103
121 1 0.000924
138 1 0.00106
142 1 0.000942
143 1 0.00114
164 1 0.00119
168 1 0.00121
1910 1 0.00144
2050 1 0.00144
2110 1 0.00144
2300 1 0.00144
2600 1 0.00144
2840 1 0.00144
2920 1 0.00144
3040 1 0.00144
3370 1 0.00144
3430 1 0.00144
3500 1 0.00144
3580 1 0.00144
4360 1 0.00144
4860 1 0.00144
4890 1 0.00144
5090 1 0.00144
5160 1 0.00144
5540 1 0.00144
5570 1 0.00144
5680 1 0.00144
6710 1 0.00144
7010 1 0.00144
8440 1 0.00144
8720 1 0.00144
9010 1 0.00144
9510 1 0.00144
9770 1 0.00144
10100 1 0.00144
10100 1 0.00144
10700 1 0.00144
10700 1 0.00144
10800 1 0.00144
10800 1 0.00144
11200 1 0.00144
11300 1 0.00145
11600 1 0.00145
11800 1 0.00144
12000 1 0.00144
13200 1 0.00144
13400 1 0.00144
14700 1 0.00144
15900 1 0.00144
16400 1 0.00144
18900 1 0.00144
19500 1 0.00144
19800 1 0.00144
20200 1 0.00144
20600 1 0.00144
20700 1 0.00144
20800 1 0.00144
22300 1 0.00144
22600 1 0.00144
22700 1 0.00144
23300 1 0.00144
25500 1 0.00144
26100 1 0.00144
26200 1 0.00144
26400 1 0.00144
27000 1 0.00144
29600 1 0.00144
30200 1 0.00144
30300 1 0.00144
30900 1 0.00144
31300 1 0.00144
31800 1 0.00144
32000 1 0.00144
32600 1 0.00144
33400 1 0.00144
33500 1 0.00144
34000 1 0.00144
34100 1 0.00144
35700 1 0.00144
36100 1 0.00144
36500 1 0.00144
37200 1 0.00144
38100 1 0.00144
39100 1 0.00144
40100 1 0.00144
41100 1 0.00144
41800 1 0.00144
42600 1 0.00144
43600 1 0.00144
45500 1 0.00144
46700 1 0.00144
46900 1 0.00144

CL110 ----> CL58

image

No. of shared pairs: :501

CL110 ----> CL57

image

No. of shared pairs: :116