Cluster no. 9

Species	Read count
S5	3790
S4	3980
S6	3990

	S5	S4	S6
S5	24000	24600	26200
S4	24600	25900	27000
S6	26200	27000	28800

	S5	S4	S6
S5	1.010	0.994	1.000
S4	0.994	1.010	0.994
S6	1.000	0.994	1.010

45	407	0.19
40	374	0.188
281	16	0.0138
10	14	0.00416
1	11	0.00247
35	9	0.00415
30	8	0.00291
59	8	0.0039
61	8	0.00344
1400	8	0.00702
2	7	0.00166
1520	7	0.00615
63	6	0.00264
83	6	0.0027
84	6	0.00327
103	6	0.00323
1110	6	0.00527
13	5	0.00194
15	5	0.00238
56	5	0.00219
107	5	0.00374
58	4	0.00172
62	4	0.00245
90	4	0.00247
113	4	0.00255
132	4	0.00311
750	4	0.00351
1760	4	0.00351
1900	4	0.00351
4060	4	0.00352
6600	4	0.00352
4	3	0.000699
7	3	0.000914
16	3	0.00137
41	3	0.00135
57	3	0.00133
94	3	0.00155
142	3	0.002
168	3	0.00236
1340	3	0.00264
1940	3	0.00264
1990	3	0.00264
3120	3	0.00264
3700	3	0.00264
4050	3	0.00264
11	2	0.000613
20	2	0.00072
25	2	0.00114
34	2	0.00126
38	2	0.00121
39	2	0.00107
54	2	0.000935
73	2	0.000991
82	2	0.0011
137	2	0.00133
178	2	0.00165
234	2	0.00171
1090	2	0.00175
1180	2	0.00176
1710	2	0.00176
2010	2	0.00176
2600	2	0.00176
3270	2	0.00176
3980	2	0.00176
5480	2	0.00176
6260	2	0.00176
7790	2	0.00176
10600	2	0.00176
11100	2	0.00176
16400	2	0.00176
16800	2	0.00176
18400	2	0.00176
19100	2	0.00176
20500	2	0.00176
26500	2	0.00176
26900	2	0.00176
27100	2	0.00176
28600	2	0.00176
28700	2	0.00176
30800	2	0.00176
33800	2	0.00176
34200	2	0.00176
35100	2	0.00176
38100	2	0.00176
38500	2	0.00176
40800	2	0.00176
42400	2	0.00176
43900	2	0.00176
46700	2	0.00176
47100	2	0.00176
47600	2	0.00176
3	1	0.000301
5	1	0.000299
12	1	0.000258
17	1	0.000381
22	1	0.000516
27	1	0.000492
28	1	0.000359
29	1	3e-04
32	1	0.000408
33	1	0.000511
42	1	0.000488
43	1	0.000506
49	1	0.000442
50	1	0.000494
51	1	0.000463
52	1	0.000512
67	1	0.000645
72	1	0.000471
78	1	0.00059
86	1	0.000576
87	1	0.00058
88	1	7e-04
99	1	0.000556
104	1	0.000557
106	1	0.000742
111	1	0.00072
121	1	0.000656
127	1	0.000768
129	1	0.000708
135	1	0.000772
136	1	0.000784
143	1	0.000757
149	1	0.000779
184	1	0.000829
194	1	0.000857
195	1	0.000833
219	1	0.000839
273	1	0.000869
275	1	0.000864
473	1	0.000873
791	1	0.00088
843	1	0.000879
888	1	0.000876
1190	1	0.000877
1740	1	0.00088
1830	1	0.000881
1920	1	0.00088
2570	1	0.00088
3190	1	0.000881
3250	1	0.00088
4030	1	0.00088
4200	1	0.000881
4260	1	0.00088
5030	1	0.000881
5500	1	0.000881
5980	1	0.000881
6190	1	0.000881
6340	1	0.000881
7740	1	0.000881
8140	1	0.000881
8410	1	0.000881
9120	1	0.000881
9940	1	0.000882
11800	1	0.000881
12300	1	0.000881
12400	1	0.000881
14500	1	0.000881
15000	1	0.000881
16000	1	0.000881
18100	1	0.000881
18500	1	0.000881
20200	1	0.000881
20300	1	0.000881
22600	1	0.000881
22900	1	0.000881
24100	1	0.000881
24400	1	0.000881
24500	1	0.000881
24500	1	0.000881
24600	1	0.000881
25300	1	0.000881
26500	1	0.000881
27600	1	0.000881
28800	1	0.000881
30300	1	0.000881
33500	1	0.000881
35100	1	0.000881
36300	1	0.000881
36800	1	0.000881
37300	1	0.000881
37400	1	0.000881
40200	1	0.000881
40400	1	0.000881
41300	1	0.000881

size	11759
size_real	11759
ecount	234366
supercluster	7
annotations_summary	0.03% Class_I/LTR/Ty1_copia/Ale:Ty1-RT 0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH 0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT 0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT 0.01% Class_I/LINE:LINE-RT 0.01% Class_I/DIRS:DIRS-RT 0.01% Class_I/LINE:LINE-RH 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-GAG 0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
pair_completeness	0.676743191216313
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.00612296964027553
satellite_probability	1.74710246978928e-21
consensus	None
TAREAN_annotation	Other
orientation_score	1

Cluster no. 9

Cluster characteristics:

comparative analysis:

Comparative analysis - species read counts:

comparative analysis - number of edges between species:

comparative analysis - observed/expected number of edges between species

protein domains:

Reads annotation summary

clusters with similarity:

clusters connected through mates: