Cluster no. 215
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Cluster is part of supercluster: 157
Cluster characteristics:
| size |
120 |
| size_real |
120 |
| ecount |
831 |
| supercluster |
157 |
| annotations_summary |
|
| pair_completeness |
0.538461538461538 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00833333333333333 |
| satellite_probability |
5.9149989235368e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
46 |
| S1 |
39 |
| S3 |
35 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
114.0 |
93.5 |
92.0 |
| S1 |
93.5 |
92.0 |
93.5 |
| S3 |
92.0 |
93.5 |
67.0 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
1.06 |
0.930 |
1.010 |
| S1 |
0.93 |
0.982 |
1.100 |
| S3 |
1.01 |
1.100 |
0.873 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 7830 |
2 |
0.103 |
| 6 |
1 |
0.00069 |
| 9 |
1 |
0.000804 |
| 14 |
1 |
0.000575 |
| 34 |
1 |
0.00341 |
| 39 |
1 |
0.000939 |
| 61 |
1 |
0.00581 |
| 81 |
1 |
0.0073 |
| 97 |
1 |
0.00233 |
| 191 |
1 |
0.012 |
| 297 |
1 |
0.0299 |
| 2550 |
1 |
0.0465 |
| 45200 |
1 |
0.0526 |
|