Cluster no. 214
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Cluster is part of supercluster: 156
Cluster characteristics:
| size |
120 |
| size_real |
120 |
| ecount |
395 |
| supercluster |
156 |
| annotations_summary |
|
| pair_completeness |
0.6 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00833333333333333 |
| satellite_probability |
3.78354838386418e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
49 |
| S1 |
43 |
| S3 |
28 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
49 |
61.0 |
38.0 |
| S1 |
61 |
49.0 |
38.5 |
| S3 |
38 |
38.5 |
22.0 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
0.884 |
1.100 |
1.030 |
| S1 |
1.100 |
0.878 |
1.040 |
| S3 |
1.030 |
1.040 |
0.896 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 394 |
4 |
0.167 |
| 169 |
2 |
0.0519 |
| 4 |
1 |
0.00044 |
| 13 |
1 |
0.000699 |
| 71 |
1 |
0.00361 |
|