Cluster no. 213
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Cluster is part of supercluster: 155
Cluster characteristics:
| size |
121 |
| size_real |
121 |
| ecount |
468 |
| supercluster |
155 |
| annotations_summary |
|
| pair_completeness |
0.753623188405797 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0743801652892562 |
| satellite_probability |
1.25331454377801e-18 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
32 |
| S1 |
47 |
| S3 |
42 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
36.0 |
47.5 |
39.0 |
| S1 |
47.5 |
70.0 |
69.5 |
| S3 |
39.0 |
69.5 |
50.0 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
1.12 |
0.970 |
0.940 |
| S1 |
0.97 |
0.937 |
1.100 |
| S3 |
0.94 |
1.100 |
0.931 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 480 |
6 |
0.429 |
| 66 |
4 |
0.0164 |
| 38 |
1 |
0.00106 |
| 1540 |
1 |
0.0833 |
|