Cluster no. 208

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Cluster is part of supercluster: 150

Cluster characteristics:

size 126
size_real 126
ecount 364
supercluster 150
annotations_summary
pair_completeness 0.482352941176471
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00793650793650794
satellite_probability 8.26675057188842e-21
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S2 58
S1 48
S3 20
comparative analysis - number of edges between species:
S2 S1 S3
S2 57.0 68.5 16.5
S1 68.5 74.0 25.5
S3 16.5 25.5 12.0
comparative analysis - observed/expected number of edges between species
S2 S1 S3
S2 1.030 1.050 0.783
S1 1.050 0.954 1.020
S3 0.783 1.020 1.500

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
36 14 0.0272
1220 5 0.182
1010 4 0.145
2340 3 0.115
3 1 0.000638
9 1 0.000802
39 1 0.000936
8760 1 0.0426
8990 1 0.0426
21700 1 0.0435

CL208 ----> CL36

image

No. of shared pairs: :14